MolNFT v2 · #207727 · protein
Crystal structure of LRP6 E3E4 in complex with disulfide constrained peptide E3.18
8DVL: “Crystal structure of LRP6 E3E4 in complex with disulfide constrained peptide E3.18”. X-ray diffraction at 2.5, 5 ligands (NAG, MAN, FUC). MolNFT v2 #207727 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 8DVL
- Type
- protein
- Length
- 624 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.5
- Source
- Homo sapiens; SYNTHETIC CONSTRUCT
- UniProt
- O75581
- Ligands
- NAG, MAN, FUC, BMA, CA
Structure
x-ray diffraction · resolution 2.5 · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 610 | — | O75581 |
| B | — | protein | 14 | — | — |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 8 copies · chains A
- MAN · alpha-D-mannopyranose · sugar · 3 copies
- FUC · alpha-L-fucopyranose · sugar · 2 copies · chains A
- BMA · beta-D-mannopyranose · sugar
- CA · Calcium ion · metal · 3 copies · chains A
- EDO · 1,2-ethanediol · additive · 7 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O75581
- Elsewhere: RCSB PDB 8DVL · PDBe 8DVL · UniProt O75581
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