MolNFT v2 · #206597 · protein
Cryo-EM structure of the unliganded mSMO-PGS2 in a lipidic environment
8CXO: “Cryo-EM structure of the unliganded mSMO-PGS2 in a lipidic environment”. Electron microscopy at 3.7, 1 ligand (CLR). MolNFT v2 #206597 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 8CXO
- Type
- protein
- Length
- 551 residues
- Chains
- 1
- Method
- electron microscopy
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 3.7
- Source
- Mus musculus; Pyrococcus abyssi (strain GE5 / Orsay)
- UniProt
- P56726, Q9V2J8
- Ligands
- CLR
Structure
electron microscopy · resolution 3.7 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 551 | — | P56726, Q9V2J8 |
Ligands and binding sites
- CLR · Cholesterol · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 8CXO · Cryo-EM structure of the unliganded msmo-PGS2 in a lipidic environment · the same entry in another collection · chain A against A, TM-score 1.00
- P56726 · AlphaFold monomer V2.0 prediction for smoothened homolog (P56726) · a predicted model of the same protein · chain A against A, TM-score 0.62
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P56726
- Every structure of UniProt Q9V2J8
- Elsewhere: RCSB PDB 8CXO · PDBe 8CXO · UniProt P56726 · UniProt Q9V2J8
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.