GL1X · GenesisL1 explorer

MolNFT v2 · #203192 · protein

Cryo-EM structure of F-actin in the Ca2+-ADP nucleotide state.

8A2Z: “Cryo-EM structure of F-actin in the Ca2+-ADP nucleotide state.”. Electron microscopy at 2.15, 2 ligands (ADP, CA). MolNFT v2 #203192 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
8A2Z
Type
protein
Length
1,830 residues
Chains
5
Method
electron microscopy
Collection
MolNFT v2 / PDB Bank
Contract
0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner
0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution
2.15
Source
Oryctolagus cuniculus
UniProt
P68135
Ligands
ADP, CA

Structure

electron microscopy · resolution 2.15 · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
C, A, B, D, E—protein366—P68135

Ligands and binding sites

  • ADP · Adenosine-5'-diphosphate · ligand · 5 copies · chains C, A, B, D, E
  • CA · Calcium ion · metal · 5 copies

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 8A2Z · Cryo-EM structure of F-actin in the CA2+-ADP nucleotide state. · the same entry in another collection · chain E against E, TM-score 1.00
  • P68135 · AlphaFold monomer V2.0 prediction for actin, alpha skeletal muscle (P68135) · a predicted model of the same protein · chain A against A, TM-score 0.96

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