MolNFT v2 · #200988 · protein + DNA + RNA
QDE-1 in complex with 12nt DNA template, ATP and 3'-dGTP
7Y7T: “QDE-1 in complex with 12nt DNA template, ATP and 3'-dGTP”. X-ray diffraction at 2.5, 3 ligands (GTP, ATP, MG). MolNFT v2 #200988 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7Y7T
- Type
- protein + DNA + RNA
- Length
- 1,880 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.5
- Source
- Neurospora crassa; SYNTHETIC CONSTRUCT
- UniProt
- Q9Y7G6
- Ligands
- GTP, ATP, MG
Structure
x-ray diffraction · resolution 2.5 · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 937 | — | Q9Y7G6 |
| B | — | protein | 930 | — | Q9Y7G6 |
| C | — | dna | 9 | — | — |
| D | — | rna | 4 | — | — |
Ligands and binding sites
- GTP · Guanosine-5'-triphosphate · ligand · chains A, C, D
- ATP · Adenosine-5'-triphosphate · ligand · chains B
- MG · Magnesium ion · metal · 5 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9Y7G6
- Elsewhere: RCSB PDB 7Y7T · PDBe 7Y7T · UniProt Q9Y7G6
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