MolNFT v2 · #180028 · protein
Odinarchaeota tubulin (OdinTubulin) H393D mutant, in a protofilament arrangement, bound to 53% GTP/47% and 2 Na+
7EVD: “Odinarchaeota tubulin (OdinTubulin) H393D mutant, in a protofilament arrangement, bound to 53% GTP/47% and 2…”. X-ray diffraction at 1.45, 3 ligands (GTP, GDP, NA). MolNFT v2 #180028 on GenesisL1: 3D structure, binding sites and…
- PDB
- 7EVD
- Type
- protein
- Length
- 422 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.45
- Source
- Odinarchaeota archaeon (strain LCB_4)
- UniProt
- A0A1Q9N9N5
- Ligands
- GTP, GDP, NA
Structure
x-ray diffraction · resolution 1.45 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | — | protein | 422 | — | A0A1Q9N9N5 |
Ligands and binding sites
- GTP · Guanosine-5'-triphosphate · ligand · chains B
- GDP · Guanosine-5'-diphosphate · ligand · chains B
- NA · Sodium ion · metal · 2 copies · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7EVD · Odinarchaeota tubulin (odintubulin) H393D mutant, in a protofilament arrangement, bound… · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A1Q9N9N5
- Elsewhere: RCSB PDB 7EVD · PDBe 7EVD · UniProt A0A1Q9N9N5
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