MolNFT v2 · #177031 · protein

Crystal structure of Cytochrome CL from the marine methylotrophic bacterium Methylophaga aminisulfidivorans MPT (Ma-CytcL)

7C90: “Crystal structure of Cytochrome CL from the marine methylotrophic bacterium Methylophaga aminisulfidivorans…”. X-ray diffraction at 2.13, 4 ligands (HEC, NA, CA). MolNFT v2 #177031 on GenesisL1: 3D structure, binding sites and…

PDB: 7C90
Type: protein
Length: 597 residues
Chains: 4
Method: x-ray diffraction
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 2.13
Source: Methylophaga aminisulfidivorans MP
UniProt: F5SWR8
Ligands: HEC, NA, CA, FE

Structure

x-ray diffraction · resolution 2.13 · 3 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	—	protein	151	—	F5SWR8
C	—	protein	145	—	F5SWR8
D	—	protein	150	—	F5SWR8

Ligands and binding sites

HEC · Heme C · ligand · 4 copies · chains A, B, D, C
NA · Sodium ion · metal · 8 copies · chains A, B, C, D
CA · Calcium ion · metal · 4 copies · chains A, B, C, D
FE · Fe (III) ion · metal · 4 copies · chains A, B, C, D
EPE · 4-(2-hydroxyethyl)-1-piperazine ethanesulfonic acid · additive · 4 copies · chains A, B, C
GOL · Glycerol · additive · 3 copies · chains B, A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

7C90 · Crystal structure of cytochrome cl from the marine methylotrophic bacterium methylophaga… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt F5SWR8
Elsewhere: RCSB PDB 7C90 · PDBe 7C90 · UniProt F5SWR8

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