MolNFT v1 · #174871 · protein
Crystal structure of cytochrome cl from the marine methylotrophic bacterium methylophaga aminisulfidivorans mpt (ma-cytcl)
7C90: “Crystal structure of cytochrome cl from the marine methylotrophic bacterium methylophaga aminisulfidivorans…”. X-ray diffraction, 4 ligands (HEC, NA, CA). MolNFT v1 #174871 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 7C90
- Type
- protein
- Length
- 597 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- F5SWR8
- Ligands
- HEC, NA, CA, FE
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 151 | — | F5SWR8 |
| C | — | protein | 145 | — | F5SWR8 |
| D | — | protein | 150 | — | F5SWR8 |
Ligands and binding sites
- HEC · Heme C · ligand · 4 copies · chains A, B, D, C
- NA · Sodium ion · metal · 8 copies · chains A, B, C, D
- CA · Calcium ion · metal · 4 copies · chains A, B, C, D
- FE · Fe (III) ion · metal · 4 copies · chains A, B, C, D
- EPE · 4-(2-hydroxyethyl)-1-piperazine ethanesulfonic acid · additive · 4 copies · chains A, B, C
- GOL · Glycerol · additive · 3 copies · chains B, A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7C90 · Crystal structure of Cytochrome CL from the marine methylotrophic bacterium Methylophaga… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt F5SWR8
- Elsewhere: RCSB PDB 7C90 · PDBe 7C90 · UniProt F5SWR8
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