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MolNFT v2 · #175541 · protein + DNA

TgoT_6G12 binary with 2 hCTPs

7B0G: “TgoT_6G12 binary with 2 hCTPs”. X-ray diffraction at 3, 2 ligands (CTP, PO4). MolNFT v2 #175541 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
7B0G
Type
protein + DNA
Length
759 residues
Chains
3
Method
x-ray diffraction
Collection
MolNFT v2 / PDB Bank
Contract
0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner
0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution
3
Source
Thermococcus gorgonarius; SYNTHETIC CONSTRUCT
UniProt
P56689
Ligands
CTP, PO4

Structure

x-ray diffraction · resolution 3 · 3 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein737—P56689
P—dna11——
T—dna11——

Ligands and binding sites

  • CTP · Cytidine-5'-triphosphate · ligand · chains A, P
  • PO4 · Phosphate ion · ion · 2 copies · chains T

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7B0G · TGOT_6G12 binary with 2 hctps · the same entry in another collection · chain A against A, TM-score 1.00
  • P56689 · AlphaFold monomer V2.0 prediction for DNA polymerase (P56689) · a predicted model of the same protein · chain A against A, TM-score 0.92

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