MolNFT v2 · #163731 · protein
Crystal structure of KDM3B in complex with 5-(1H-tetrazol-5-yl)quinolin-8-ol
6RBJ: “Crystal structure of KDM3B in complex with 5-(1H-tetrazol-5-yl)quinolin-8-ol”. X-ray diffraction at 2.093, 3 ligands (JX8, MN, CL). MolNFT v2 #163731 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6RBJ
- Type
- protein
- Length
- 676 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.093
- Source
- Homo sapiens
- UniProt
- Q7LBC6
- Ligands
- JX8, MN, CL
Structure
x-ray diffraction · resolution 2.093 · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 335 | — | Q7LBC6 |
| B | — | protein | 341 | — | Q7LBC6 |
Ligands and binding sites
- JX8 · 5-(1~{H}-1,2,3,4-tetrazol-5-yl)quinolin-8-ol · ligand · 2 copies · chains A, B
- MN · Manganese (II) ion · metal · 2 copies · chains A, B
- CL · Chloride ion · ion · chains A
- EDO · 1,2-ethanediol · additive · 5 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6RBJ · Crystal structure of KDM3B in complex with 5-(1H-tetrazol-5-yl) quinolin-8-ol · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7LBC6
- Elsewhere: RCSB PDB 6RBJ · PDBe 6RBJ · UniProt Q7LBC6
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