MolNFT v2 · #161416 · protein
Crystal structure of TS-DHFR from Cryptosporidium hominis in complex with NADPH, FdUMP and 2-(2-(4-((2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-5-yl)methyl)benzamido)phenyl)acetic acid.
6PF9: “Crystal structure of TS-DHFR from Cryptosporidium hominis in complex with NADPH, FdUMP and…”. X-ray diffraction at 2.89, 4 ligands (NDP, UFP, OF7). MolNFT v2 #161416 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6PF9
- Type
- protein
- Length
- 2,534 residues
- Chains
- 5
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.89
- Source
- Cryptosporidium hominis
- UniProt
- A0A0S4TER9
- Ligands
- NDP, UFP, OF7, SO4
Structure
x-ray diffraction · resolution 2.89 · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D | — | protein | 507 | — | A0A0S4TER9 |
| E | — | protein | 506 | — | A0A0S4TER9 |
Ligands and binding sites
- NDP · Nadph dihydro-nicotinamide-adenine-dinucleotide phosphate · ligand · 5 copies · chains A, B, C, D, E
- UFP · 5-fluoro-2'-deoxyuridine-5'-monophosphate · ligand · 5 copies · chains A, B, C, D, E
- OF7 · [2-({4-[(2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-5-yl)methyl]benzene-1-carbonyl}amino) phenyl]acetic acid · ligand · 5 copies · chains A, B, C, D, E
- SO4 · Sulfate ion · ion · 5 copies · chains A, B, C, D, E
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6PF9 · Crystal structure of ts-DHFR from cryptosporidium hominis in complex with NADPH, fdump… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0S4TER9
- Elsewhere: RCSB PDB 6PF9 · PDBe 6PF9 · UniProt A0A0S4TER9
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