MolNFT v2 · #159217 · protein

EphA2 LBD in complex with bA-WLA-YSKbio peptide

6NKP: “EphA2 LBD in complex with bA-WLA-YSKbio peptide”. X-ray diffraction at 2.033, 1 ligand (BTN). MolNFT v2 #159217 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6NKP
Type: protein
Length: 377 residues
Chains: 4
Method: x-ray diffraction
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 2.033
Source: Homo sapiens; SYNTHETIC CONSTRUCT
UniProt: P29317
Ligands: BTN

Structure

x-ray diffraction · resolution 2.033 · 4 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	175	—	P29317
B	—	protein	179	—	P29317
C	—	protein	11	—	—
D	—	protein	12	—	—

Ligands and binding sites

BTN · Biotin · ligand · chains B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6NKP · EPHA2 lbd in complex with ba-wla-yskbio peptide · the same entry in another collection · chain A against A, TM-score 1.00
P29317 · AlphaFold monomer V2.0 prediction for ephrin type-a receptor 2 (P29317) · a predicted model of the same protein · chain A against A, TM-score 0.97

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P29317
Elsewhere: RCSB PDB 6NKP · PDBe 6NKP · UniProt P29317

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