MolNFT v2 · #156925 · protein
The crystal structure of cyanorhodopsin (CyR) N2098R from cyanobacteria Calothrix sp. NIES-2098
6LM0: “The crystal structure of cyanorhodopsin (CyR) N2098R from cyanobacteria Calothrix sp. NIES-2098”. X-ray diffraction at 2.65, 3 ligands (C14, RET, D10). MolNFT v2 #156925 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6LM0
- Type
- protein
- Length
- 709 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.65
- Source
- Calothrix sp. NIES-2098
- UniProt
- A0A1Z4FUT4
- Ligands
- C14, RET, D10
Structure
x-ray diffraction · resolution 2.65 · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 240 | — | A0A1Z4FUT4 |
| B | — | protein | 227 | — | A0A1Z4FUT4 |
| C | — | protein | 242 | — | A0A1Z4FUT4 |
Ligands and binding sites
- C14 · Tetradecane · ligand · 4 copies · chains A, B, C
- RET · Retinal · ligand · 3 copies · chains A, B, C
- D10 · Decane · ligand · 2 copies · chains A, B, C
- OCT · N-octane · additive · 4 copies · chains A, C, B
- HEX · Hexane · additive · 3 copies · chains A, C, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6LM0 · The crystal structure of cyanorhodopsin (cyr) N2098R from cyanobacteria calothrix sp.… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A1Z4FUT4
- Elsewhere: RCSB PDB 6LM0 · PDBe 6LM0 · UniProt A0A1Z4FUT4
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