MolNFT v2 · #156810 · protein
Heteromeric amino acid transporter b0,+AT-rBAT complex bound with Arginine
6LI9: “Heteromeric amino acid transporter b0,+AT-rBAT complex bound with Arginine”. Electron microscopy at 2.3, 3 ligands (3PH, NAG, CA). MolNFT v2 #156810 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6LI9
- Type
- protein
- Length
- 2,164 residues
- Chains
- 4
- Method
- electron microscopy
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.3
- Source
- Homo sapiens
- UniProt
- Q07837, P82251
- Ligands
- 3PH, NAG, CA
Structure
electron microscopy · resolution 2.3 · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C | — | protein | 623 | — | Q07837 |
| B, D | — | protein | 459 | — | P82251 |
Ligands and binding sites
- 3PH · 1,2-diacyl-glycerol-3-sn-phosphate · ligand · 4 copies · chains A, B, C, D
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 20 copies · chains A, C
- CA · Calcium ion · metal · 2 copies · chains A, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6LI9 · Heteromeric amino acid transporter B0,+AT-rbat complex bound with arginine · the same entry in another collection · chain A against A, TM-score 1.00
- Q07837 · AlphaFold monomer V2.0 prediction for neutral and basic amino acid transport protein rbat… · a predicted model of the same protein · chain A against A, TM-score 0.96
- P82251 · AlphaFold monomer V2.0 prediction for B(0,+)-type amino acid transporter 1 (P82251) · a predicted model of the same protein · chain B against A, TM-score 0.93
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q07837
- Every structure of UniProt P82251
- Elsewhere: RCSB PDB 6LI9 · PDBe 6LI9 · UniProt Q07837 · UniProt P82251
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