MolNFT v2 · #155549 · protein
Structure of CavAb in complex with Diltiazem and Amlodipine
6KE5: “Structure of CavAb in complex with Diltiazem and Amlodipine”. X-ray diffraction at 2.803, 5 ligands (G3P, LPC, 6UB). MolNFT v2 #155549 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6KE5
- Type
- protein
- Length
- 902 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.803
- Source
- Arcobacter butzleri RM4018
- UniProt
- A8EVM5
- Ligands
- G3P, LPC, 6UB, D6C, CA
Structure
x-ray diffraction · resolution 2.803 · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C | — | protein | 219 | — | A8EVM5 |
| B, D | — | protein | 232 | — | A8EVM5 |
Ligands and binding sites
- G3P · Sn-glycerol-3-phosphate · ligand · 5 copies · chains A, C, B, D
- LPC · [1-myristoyl-glycerol-3-yl]phosphonylcholine · ligand · 3 copies · chains A, B, C, D
- 6UB · amlodipine · ligand · chains B, D
- D6C · [(2~{S},3~{R})-5-[2-(dimethylamino)ethyl]-2-(4-methoxyphenyl)-4-oxidanylidene-2,3-dihydro-1,5-benzothiazepin-3-yl] ethanoate · ligand · chains C, D
- CA · Calcium ion · metal · 3 copies · chains A, C, D, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6KE5 · Structure of cavab in complex with diltiazem and amlodipine · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A8EVM5
- Elsewhere: RCSB PDB 6KE5 · PDBe 6KE5 · UniProt A8EVM5
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