GL1X · GenesisL1 explorer

MolNFT v2 · #155250 · protein

Crystal structure of Se-labelled SidJ complex with CaM at 2.95 A

6K4L: “Crystal structure of Se-labelled SidJ complex with CaM at 2.95 A”. X-ray diffraction at 2.949, 2 ligands (CA, CL). MolNFT v2 #155250 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6K4L
Type
protein
Length
1,656 residues
Chains
4
Method
x-ray diffraction
Collection
MolNFT v2 / PDB Bank
Contract
0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner
0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution
2.949
Source
Homo sapiens; Legionella pneumophila subsp. pneumophila str. Philadelphia 1
UniProt
Q5ZTK6, P0DP23
Ligands
CA, CL

Structure

x-ray diffraction · resolution 2.949 · 4 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein728—Q5ZTK6
B—protein736—Q5ZTK6
C—protein111—P0DP23
D—protein81—P0DP23

Ligands and binding sites

  • CA · Calcium ion · metal · 2 copies · chains C, D
  • CL · Chloride ion · ion · 4 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6K4L · Crystal structure of se-labelled sidj complex with cam at 2.95 a · the same entry in another collection · chain D against D, TM-score 1.00
  • Q5ZTK6 · AlphaFold monomer V2.0 prediction for calmodulin-dependent glutamylase sidj (Q5ZTK6) · a predicted model of the same protein · chain A against A, TM-score 1.00
  • P0DP23 · AlphaFold monomer V2.0 prediction for calmodulin-1 (P0DP23) · a predicted model of the same protein · chain D against A, TM-score 0.55

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