MolNFT v2 · #152130 · protein
Crystal structure of the Protease 1 (E29A,E60A,E80A) from Pyrococcus horikoshii co-crystallized with Tb-Xo4.
6HF6: “Crystal structure of the Protease 1 (E29A,E60A,E80A) from Pyrococcus horikoshii co-crystallized with Tb-Xo4.”. X-ray diffraction at 2, 2 ligands (7MT, TB). MolNFT v2 #152130 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 6HF6
- Type
- protein
- Length
- 498 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2
- Source
- Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139…
- UniProt
- O59413
- Ligands
- 7MT, TB
Structure
x-ray diffraction · resolution 2 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C | — | protein | 166 | — | O59413 |
Ligands and binding sites
- 7MT · Tb-Xo4 · ligand · 3 copies · chains A, B, C
- TB · Terbium(iii) ion · metal · 4 copies · chains A, B, C
- MLI · Malonate ion · additive · 3 copies · chains A, B, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6HF6 · Crystal structure of the protease 1 (E29A,E60A,E80A) from pyrococcus horikoshii… · the same entry in another collection · chain A against A, TM-score 1.00
- O59413 · AlphaFold monomer V2.0 prediction for deglycase PH1704 (O59413) · a predicted model of the same protein · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O59413
- Elsewhere: RCSB PDB 6HF6 · PDBe 6HF6 · UniProt O59413
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