MolNFT v2 · #152110 · protein

Structure of human USP28 bound to Ubiquitin-PA

6HEK: “Structure of human USP28 bound to Ubiquitin-PA”. X-ray diffraction at 3.03, 1 ligand (CL). MolNFT v2 #152110 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6HEK
Type: protein
Length: 1,063 residues
Chains: 4
Method: x-ray diffraction
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 3.03
Source: Homo sapiens
UniProt: Q96RU2, P0CG47
Ligands: CL

Structure

x-ray diffraction · resolution 3.03 · 4 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	453	—	Q96RU2
B	—	protein	77	—	P0CG47
C	—	protein	459	—	Q96RU2
D	—	protein	74	—	P0CG47

Ligands and binding sites

CL · Chloride ion · ion · chains A
PG4 · Tetraethylene glycol · additive · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6HEK · Structure of human USP28 bound to ubiquitin-pa · the same entry in another collection · chain A against A, TM-score 1.00
Q96RU2 · AlphaFold monomer V2.0 prediction for ubiquitin carboxyl-terminal hydrolase 28 (Q96RU2) · a predicted model of the same protein · chain A against A, TM-score 0.96

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q96RU2
Every structure of UniProt P0CG47
Elsewhere: RCSB PDB 6HEK · PDBe 6HEK · UniProt Q96RU2 · UniProt P0CG47

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