MolNFT v2 · #151819 · protein + RNA
CryoEM structure of the MDA5-dsRNA filament with 93 degree twist and without nucleotide
6H66: “CryoEM structure of the MDA5-dsRNA filament with 93 degree twist and without nucleotide”. Electron microscopy at 4.16, 1 ligand (ZN). MolNFT v2 #151819 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6H66
- Type
- protein + RNA
- Length
- 697 residues
- Chains
- 3
- Method
- electron microscopy
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 4.16
- Source
- Mus musculus; SYNTHETIC CONSTRUCT
- UniProt
- Q8R5F7
- Ligands
- ZN
Structure
electron microscopy · resolution 4.16 · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 667 | — | Q8R5F7 |
| X | — | rna | 15 | — | — |
| Y | — | rna | 15 | — | — |
Ligands and binding sites
- ZN · Zinc ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6H66 · Cryoem structure of the MDA5-dsrna filament with 93 degree twist and without nucleotide · the same entry in another collection · chain A against A, TM-score 1.00
- Q8R5F7 · AlphaFold monomer V2.0 prediction for interferon-induced helicase C domain-containing… · a predicted model of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8R5F7
- Elsewhere: RCSB PDB 6H66 · PDBe 6H66 · UniProt Q8R5F7
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