MolNFT v2 · #151588 · RNA
Solution NMR structure of the tetramethylrhodamine (TMR) aptamer 3 in complex with 5-TAMRA
6GZK: “Solution NMR structure of the tetramethylrhodamine (TMR) aptamer 3 in complex with 5-TAMRA”. Solution nmr at NOT, 1 ligand (FH8). MolNFT v2 #151588 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6GZK
- Type
- RNA
- Length
- 48 nucleotides
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- NOT
- Source
- synthetic construct
- Ligands
- FH8
Structure
solution nmr · resolution NOT · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | rna | 48 | — | — |
Ligands and binding sites
- FH8 · 5-carboxy methylrhodamine · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6GZK · Solution NMR structure of the tetramethylrhodamine (tmr) aptamer 3 in complex with 5-tamra · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6GZK · PDBe 6GZK
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