MolNFT v2 · #151146 · protein
pVHL:EloB:EloC in complex with (4-(1H-pyrrol-1-yl)phenyl)methanol
6GMR: “pVHL:EloB:EloC in complex with (4-(1H-pyrrol-1-yl)phenyl)methanol”. X-ray diffraction at 1.75, 2 ligands (F4K, SO4). MolNFT v2 #151146 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6GMR
- Type
- protein
- Length
- 359 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.75
- Source
- Homo sapiens; SYNTHETIC CONSTRUCT
- UniProt
- Q15370, Q15369, P40337
- Ligands
- F4K, SO4
Structure
x-ray diffraction · resolution 1.75 · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | — | protein | 105 | — | Q15370 |
| C | — | protein | 89 | — | Q15369 |
| H | — | protein | 16 | — | — |
| V | — | protein | 149 | — | P40337 |
Ligands and binding sites
- F4K · (4-pyrrol-1-ylphenyl)methanol · ligand · chains V
- SO4 · Sulfate ion · ion · chains B, C
- GOL · Glycerol · additive · chains C, V
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6GMR · PVHL:ELOB:ELOC in complex with (4-(1H-pyrrol-1-YL)PHENYL)METHANOL · the same entry in another collection · chain B against B, TM-score 1.00
- P40337 · AlphaFold monomer V2.0 prediction for von hippel-lindau disease tumor suppressor (P40337) · a predicted model of the same protein · chain V against A, TM-score 0.99
- Q15370 · AlphaFold monomer V2.0 prediction for elongin-B (Q15370) · a predicted model of the same protein · chain B against A, TM-score 0.99
- Q15369 · AlphaFold monomer V2.0 prediction for elongin-C (Q15369) · a predicted model of the same protein · chain C against A, TM-score 0.95
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q15370
- Every structure of UniProt Q15369
- Every structure of UniProt P40337
- Elsewhere: RCSB PDB 6GMR · PDBe 6GMR · UniProt Q15370 · UniProt Q15369 · UniProt P40337
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