MolNFT v2 · #147532 · protein

Calmodulin-bound full-length rbTRPV5

6DMW: “Calmodulin-bound full-length rbTRPV5”. Electron microscopy at 4.4, 1 ligand (CA). MolNFT v2 #147532 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6DMW
Type: protein
Length: 2,562 residues
Chains: 5
Method: electron microscopy
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 4.4
Source: Oryctolagus cuniculus; Rattus norvegicus
UniProt: Q9XSM3, P0DP29
Ligands: CA

Structure

electron microscopy · resolution 4.4 · 5 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	631	—	Q9XSM3
E	—	protein	113	—	P0DP29
B	—	protein	605	—	Q9XSM3
C	—	protein	606	—	Q9XSM3
D	—	protein	607	—	Q9XSM3

Ligands and binding sites

CA · Calcium ion · metal · 3 copies · chains E

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6DMW · Calmodulin-bound full-length RBTRPV5 · the same entry in another collection · chain A against A, TM-score 1.00
P0DP29 · AlphaFold monomer V2.0 prediction for calmodulin-1 (P0DP29) · a predicted model of the same protein · chain E against A, TM-score 0.55

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9XSM3
Every structure of UniProt P0DP29
Elsewhere: RCSB PDB 6DMW · PDBe 6DMW · UniProt Q9XSM3 · UniProt P0DP29

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