MolNFT v2 · #144904 · protein

Crystal Structure of Human Calpain-3 Protease Core Mutant-C129A

6BGP: “Crystal Structure of Human Calpain-3 Protease Core Mutant-C129A”. X-ray diffraction at 2.75, 2 ligands (CA, CL). MolNFT v2 #144904 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6BGP
Type: protein
Length: 1,244 residues
Chains: 4
Method: x-ray diffraction
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 2.75
Source: Homo sapiens
UniProt: P20807
Ligands: CA, CL

Structure

x-ray diffraction · resolution 2.75 · 3 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	303	—	P20807
B, D	—	protein	314	—	P20807
C	—	protein	313	—	P20807

Ligands and binding sites

CA · Calcium ion · metal · 8 copies · chains A, B, C, D
CL · Chloride ion · ion · 4 copies · chains A, B, C, D

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6BGP · Crystal structure of human calpain-3 protease core mutant-C129A · the same entry in another collection · chain D against D, TM-score 1.00
P20807 · AlphaFold monomer V2.0 prediction for calpain-3 (P20807) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P20807
Elsewhere: RCSB PDB 6BGP · PDBe 6BGP · UniProt P20807

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