MolNFT v1 · #144014 · protein

Crystal structure of human calpain-3 protease core mutant-C129A

6BGP: “Crystal structure of human calpain-3 protease core mutant-C129A”. X-ray diffraction, 2 ligands (CA, CL). MolNFT v1 #144014 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6BGP
Type: protein
Length: 1,244 residues
Chains: 4
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P20807
Ligands: CA, CL

Structure

x-ray diffraction · 3 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	303	—	P20807
B, D	—	protein	314	—	P20807
C	—	protein	313	—	P20807

Ligands and binding sites

CA · Calcium ion · metal · 8 copies · chains A, B, C, D
CL · Chloride ion · ion · 4 copies · chains A, B, C, D

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6BGP · Crystal Structure of Human Calpain-3 Protease Core Mutant-C129A · the same entry in another collection · chain D against D, TM-score 1.00
P20807 · AlphaFold monomer V2.0 prediction for calpain-3 (P20807) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P20807
Elsewhere: RCSB PDB 6BGP · PDBe 6BGP · UniProt P20807

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