MolNFT v2 · #142700 · protein
Stapled-peptides tailored against initiation of translation
5ZK7: “Stapled-peptides tailored against initiation of translation”. X-ray diffraction at 2.12, 3 ligands (MGT, IOD, CL). MolNFT v2 #142700 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5ZK7
- Type
- protein
- Length
- 377 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.12
- Source
- Homo sapiens; SYNTHETIC CONSTRUCT
- UniProt
- P06730
- Ligands
- MGT, IOD, CL
Structure
x-ray diffraction · resolution 2.12 · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 178 | — | P06730 |
| B | — | protein | 175 | — | P06730 |
| C, D | — | protein | 12 | — | — |
Ligands and binding sites
- MGT · 7N-methyl-8-hydroguanosine-5'-triphosphate · ligand · 2 copies · chains A, B
- IOD · Iodide ion · ion · 5 copies · chains A, C, D
- CL · Chloride ion · ion · chains A, C
- GOL · Glycerol · additive · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5ZK7 · Stapled-peptides tailored against initiation of translation · the same entry in another collection · chain A against A, TM-score 1.00
- P06730 · AlphaFold monomer V2.0 prediction for eukaryotic translation initiation factor 4E (P06730) · a predicted model of the same protein · chain B against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P06730
- Elsewhere: RCSB PDB 5ZK7 · PDBe 5ZK7 · UniProt P06730
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