MolNFT v2 · #141765 · protein
Crystal structure of an actin monomer in complex with the nucleator Cordon-Bleu MET72NLE WH2-motif peptide
5YPU: “Crystal structure of an actin monomer in complex with the nucleator Cordon-Bleu MET72NLE WH2-motif peptide”. X-ray diffraction at 2, 2 ligands (ATP, CA). MolNFT v2 #141765 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 5YPU
- Type
- protein
- Length
- 749 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2
- Source
- Oryctolagus cuniculus; SYNTHETIC CONSTRUCT
- UniProt
- P68135
- Ligands
- ATP, CA
Structure
x-ray diffraction · resolution 2 · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 352 | — | P68135 |
| B, D | — | protein | 22 | — | — |
| C | — | protein | 353 | — | P68135 |
Ligands and binding sites
- ATP · Adenosine-5'-triphosphate · ligand · 2 copies · chains A, C
- CA · Calcium ion · metal · 7 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5YPU · Crystal structure of an actin monomer in complex with the nucleator cordon-bleu MET72NLE… · the same entry in another collection · chain A against A, TM-score 1.00
- P68135 · AlphaFold monomer V2.0 prediction for actin, alpha skeletal muscle (P68135) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P68135
- Elsewhere: RCSB PDB 5YPU · PDBe 5YPU · UniProt P68135
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