MolNFT v2 · #139889 · protein
Polygalacturonate Lyase by Fusing with a Self-assembling Amphipathic Peptide
5X2I: “Polygalacturonate Lyase by Fusing with a Self-assembling Amphipathic Peptide”. X-ray diffraction at 2.05, 2 ligands (CA, CL). MolNFT v2 #139889 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5X2I
- Type
- protein
- Length
- 399 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.05
- Source
- Bacillus subtilis subsp. subtilis str. 168
- UniProt
- P39116
- Ligands
- CA, CL
Structure
x-ray diffraction · resolution 2.05 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 399 | — | P39116 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5X2I · Polygalacturonate lyase by fusing with a self-assembling amphipathic peptide · the same entry in another collection · chain A against A, TM-score 1.00
- P39116 · AlphaFold monomer V2.0 prediction for pectate lyase (P39116) · a predicted model of the same protein · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P39116
- Elsewhere: RCSB PDB 5X2I · PDBe 5X2I · UniProt P39116
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