MolNFT v2 · #136743 · protein + RNA
IFIT1 monomeric mutant (L457E/L464E) with PPP-AAAA
5UDK: “IFIT1 monomeric mutant (L457E/L464E) with PPP-AAAA”. X-ray diffraction at 1.65, 1 ligand (CA). MolNFT v2 #136743 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5UDK
- Type
- protein + RNA
- Length
- 465 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.65
- Source
- Homo sapiens; SYNTHETIC CONSTRUCT
- UniProt
- P09914
- Ligands
- CA
Structure
x-ray diffraction · resolution 1.65 · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 461 | — | P09914 |
| B | — | rna | 4 | — | — |
Ligands and binding sites
- CA · Calcium ion · metal · 2 copies · chains A
- PGE · Triethylene glycol · additive · 2 copies · chains A, B
- PEG · Di(hydroxyethyl)ether · additive · chains A
- EDO · 1,2-ethanediol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5UDK · IFIT1 monomeric mutant (L457E/L464E) with ppp-aaaa · the same entry in another collection · chain A against A, TM-score 1.00
- P09914 · AlphaFold monomer V2.0 prediction for interferon-induced protein with tetratricopeptide… · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P09914
- Elsewhere: RCSB PDB 5UDK · PDBe 5UDK · UniProt P09914
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