MolNFT v2 · #129965 · protein
Alzheimer's Amyloid-Beta Peptide Fragment 1-40 in Complex with Thermolysin
5ONR: “Alzheimer's Amyloid-Beta Peptide Fragment 1-40 in Complex with Thermolysin”. X-ray diffraction at 1.39, 2 ligands (CA, ZN). MolNFT v2 #129965 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5ONR
- Type
- protein
- Length
- 319 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.39
- Source
- Bacillus thermoproteolyticus; SYNTHETIC CONSTRUCT
- UniProt
- P00800
- Ligands
- CA, ZN
Structure
x-ray diffraction · resolution 1.39 · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 316 | — | P00800 |
| B | — | protein | 3 | — | — |
Ligands and binding sites
- CA · Calcium ion · metal · 4 copies · chains A
- ZN · Zinc ion · metal · chains A
- DMS · Dimethyl sulfoxide · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5ONR · ALZHEIMER'S amyloid-beta peptide fragment 1-40 in complex with thermolysin · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P00800
- Elsewhere: RCSB PDB 5ONR · PDBe 5ONR · UniProt P00800
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