MolNFT v2 · #129908 · protein
Crystal structure of Alpha1-antichymotrypsin variant DBS-I-allo2: a MMP9-cleavable drug-binding serpin for doxycycline
5OM6: “Crystal structure of Alpha1-antichymotrypsin variant DBS-I-allo2: a MMP9-cleavable drug-binding serpin for…”. X-ray diffraction at 1.849, 1 ligand (CL). MolNFT v2 #129908 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5OM6
- Type
- protein
- Length
- 752 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.849
- Source
- Homo sapiens
- UniProt
- P01011
- Ligands
- CL
Structure
x-ray diffraction · resolution 1.849 · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 339 | — | P01011 |
| B, D | — | protein | 39 | — | P01011 |
| C | — | protein | 335 | — | P01011 |
Ligands and binding sites
- CL · Chloride ion · ion · chains C, D
- CIT · Citric acid · additive · 2 copies · chains A, B, C, D
- EDO · 1,2-ethanediol · additive · 2 copies · chains A, B, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5OM6 · Crystal structure of ALPHA1-antichymotrypsin variant dbs-I-ALLO2: a MMP9-cleavable… · the same entry in another collection · chain D against D, TM-score 1.00
- P01011 · AlphaFold monomer V2.0 prediction for alpha-1-antichymotrypsin (P01011) · a predicted model of the same protein · chain A against A, TM-score 0.92
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P01011
- Elsewhere: RCSB PDB 5OM6 · PDBe 5OM6 · UniProt P01011
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