MolNFT v2 · #129884 · protein
Structure of the A2A-StaR2-bRIL562-Vipadenant complex at 2.6A obtained from in meso soaking experiments.
5OLH: “Structure of the A2A-StaR2-bRIL562-Vipadenant complex at 2.6A obtained from in meso soaking experiments.”. X-ray diffraction at 2.6, 4 ligands (OLA, CLR, 9XT). MolNFT v2 #129884 on GenesisL1: 3D structure, binding sites and pockets…
- PDB
- 5OLH
- Type
- protein
- Length
- 390 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.6
- Source
- Escherichia coli; Homo sapiens
- UniProt
- P29274, P0ABE7
- Ligands
- OLA, CLR, 9XT, NA
Structure
x-ray diffraction · resolution 2.6 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 390 | — | P29274, P0ABE7 |
Ligands and binding sites
- OLA · Oleic acid · ligand · 15 copies · chains A
- CLR · Cholesterol · ligand · 3 copies · chains A
- 9XT · 3-[(4-azanyl-3-methyl-phenyl)methyl]-7-(furan-2-yl)-[1,2,3]triazolo[4,5-d]pyrimidin-5-amine · ligand · chains A
- NA · Sodium ion · metal · chains A
- OLC · (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate · additive · 8 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5OLH · Structure of the A2A-STAR2-BRIL562-vipadenant complex at 2.6A obtained from in meso… · the same entry in another collection · chain A against A, TM-score 1.00
- P29274 · AlphaFold monomer V2.0 prediction for adenosine receptor A2A (P29274) · a predicted model of the same protein · chain A against A, TM-score 0.78
- P0ABE7 · AlphaFold monomer V2.0 prediction for soluble cytochrome B562 (P0ABE7) · a predicted model of the same protein · chain A against A, TM-score 0.26
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P29274
- Every structure of UniProt P0ABE7
- Elsewhere: RCSB PDB 5OLH · PDBe 5OLH · UniProt P29274 · UniProt P0ABE7
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