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MolNFT v2 · #129884 · protein

Structure of the A2A-StaR2-bRIL562-Vipadenant complex at 2.6A obtained from in meso soaking experiments.

5OLH: “Structure of the A2A-StaR2-bRIL562-Vipadenant complex at 2.6A obtained from in meso soaking experiments.”. X-ray diffraction at 2.6, 4 ligands (OLA, CLR, 9XT). MolNFT v2 #129884 on GenesisL1: 3D structure, binding sites and pockets…

PDB
5OLH
Type
protein
Length
390 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v2 / PDB Bank
Contract
0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner
0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution
2.6
Source
Escherichia coli; Homo sapiens
UniProt
P29274, P0ABE7
Ligands
OLA, CLR, 9XT, NA

Structure

x-ray diffraction · resolution 2.6 · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein390—P29274, P0ABE7

Ligands and binding sites

  • OLA · Oleic acid · ligand · 15 copies · chains A
  • CLR · Cholesterol · ligand · 3 copies · chains A
  • 9XT · 3-[(4-azanyl-3-methyl-phenyl)methyl]-7-(furan-2-yl)-[1,2,3]triazolo[4,5-d]pyrimidin-5-amine · ligand · chains A
  • NA · Sodium ion · metal · chains A
  • OLC · (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate · additive · 8 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 5OLH · Structure of the A2A-STAR2-BRIL562-vipadenant complex at 2.6A obtained from in meso… · the same entry in another collection · chain A against A, TM-score 1.00
  • P29274 · AlphaFold monomer V2.0 prediction for adenosine receptor A2A (P29274) · a predicted model of the same protein · chain A against A, TM-score 0.78
  • P0ABE7 · AlphaFold monomer V2.0 prediction for soluble cytochrome B562 (P0ABE7) · a predicted model of the same protein · chain A against A, TM-score 0.26

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