MolNFT v2 · #129766 · protein
A GH31 family sulfoquinovosidase from E. coli in complex with aza-sugar inhibitor IFGSQ
5OHT: “A GH31 family sulfoquinovosidase from E. coli in complex with aza-sugar inhibitor IFGSQ”. X-ray diffraction at 1.87, 2 ligands (9VH, CA). MolNFT v2 #129766 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5OHT
- Type
- protein
- Length
- 1,336 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.87
- Source
- Escherichia coli (strain K12)
- UniProt
- P32138
- Ligands
- 9VH, CA
Structure
x-ray diffraction · resolution 1.87 · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 670 | — | P32138 |
| B | — | protein | 666 | — | P32138 |
Ligands and binding sites
- 9VH · [(3~{S},4~{R},5~{R})-4,5-bis(oxidanyl)piperidin-3-yl]methanesulfonic acid · ligand · 2 copies · chains A, B
- CA · Calcium ion · metal · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5OHT · A GH31 family sulfoquinovosidase from E. COLI in complex with aza- sugar inhibitor ifgsq · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P32138
- Elsewhere: RCSB PDB 5OHT · PDBe 5OHT · UniProt P32138
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.