MolNFT v1 · #129356 · protein
A GH31 family sulfoquinovosidase from E. COLI in complex with aza- sugar inhibitor ifgsq
5OHT: “A GH31 family sulfoquinovosidase from E. COLI in complex with aza- sugar inhibitor ifgsq”. X-ray diffraction, 2 ligands (9VH, CA). MolNFT v1 #129356 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5OHT
- Type
- protein
- Length
- 1,336 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P32138
- Ligands
- 9VH, CA
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 670 | — | P32138 |
| B | — | protein | 666 | — | P32138 |
Ligands and binding sites
- 9VH · [(3~{S},4~{R},5~{R})-4,5-bis(oxidanyl)piperidin-3-yl]methanesulfonic acid · ligand · 2 copies · chains A, B
- CA · Calcium ion · metal · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5OHT · A GH31 family sulfoquinovosidase from E. coli in complex with aza-sugar inhibitor IFGSQ · the same entry in another collection · chain A against A, TM-score 1.00
- P32138 · AlphaFold monomer V2.0 prediction for sulfoquinovosidase (P32138) · a predicted model of the same protein · chain B against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P32138
- Elsewhere: RCSB PDB 5OHT · PDBe 5OHT · UniProt P32138
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