MolNFT v1 · #9257 · protein
Crystal structure of thermus aquaticus core RNA polymerase-includes complete structure with side-chains (except for disordered regions)- further refined from original deposition-contains additional sequence information
1HQM: “Crystal structure of thermus aquaticus core RNA polymerase-includes complete structure with side-chains…”. X-ray diffraction. MolNFT v1 #9257 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1HQM
- Type
- protein
- Length
- 2,838 residues
- Chains
- 5
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q9KWU8, Q9KWU7, Q9KWU6, Q9EVV4
Structure
x-ray diffraction · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 223 | — | Q9KWU8 |
| B | — | protein | 229 | — | Q9KWU8 |
| C | — | protein | 1113 | — | Q9KWU7 |
| D | — | protein | 1175 | — | Q9KWU6 |
| E | — | protein | 98 | — | Q9EVV4 |
Compared structures
- 1HQM · Crystal structure of thermus aquaticus core RNA polymerase-includes complete structure… · the same entry in another collection · chain E against E, TM-score 1.00
- Q9KWU7 · AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (Q9KWU7) · a predicted model of the same protein · chain C against A, TM-score 0.94
- Q9KWU8 · AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha (Q9KWU8) · a predicted model of the same protein · chain A against A, TM-score 0.93
- Q9KWU6 · AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta' (Q9KWU6) · a predicted model of the same protein · chain D against A, TM-score 0.92
- Q9EVV4 · AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit omega (Q9EVV4) · a predicted model of the same protein · chain E against A, TM-score 0.87
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9KWU8
- Every structure of UniProt Q9KWU7
- Every structure of UniProt Q9KWU6
- Every structure of UniProt Q9EVV4
- Elsewhere: RCSB PDB 1HQM · PDBe 1HQM · UniProt Q9KWU8 · UniProt Q9KWU7 · UniProt Q9KWU6 · UniProt Q9EVV4
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