UniProt Q9KWU7
DNA-directed RNA polymerase subunit beta (Q9KWU7)
DNA-directed RNA polymerase subunit beta (UniProt Q9KWU7), EC 2.7.7.6: 27 experimental structures and 1 predicted model on GenesisL1, 38 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q9KWU7
- Protein
- DNA-directed RNA polymerase subunit beta
- EC
- 2.7.7.6
- Experimental structures
- 27
- Predicted models
- 1
- Pockets
- 38 · 3 records with a druggable one
Structures
28 records of Q9KWU7 in the MolNFT archive: 27 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 1HQM | Crystal structure of thermus aquaticus core RNA polymerase-includes complete structure with… | x-ray diffraction | C | — | — |
| 1HQM | Crystal structure of thermus aquaticus core RNA polymerase-includes complete structure with… | x-ray diffraction | C | — | — |
| 1I6V | Thermus aquaticus core RNA polymerase-rifampicin complex | x-ray diffraction | C | — | — |
| 1I6V | Thermus aquaticus core RNA polymerase-rifampicin complex | x-ray diffraction | C | — | — |
| 1L9U | Thermus aquaticus RNA polymerase holoenzyme at 4 a resolution | x-ray diffraction | C, L | — | — |
| 1L9U | Thermus aquaticus RNA polymerase holoenzyme at 4 a resolution | x-ray diffraction | C, L | — | — |
| 1L9Z | Thermus aquaticus RNA Polymerase Holoenzyme/Fork-Junction Promoter DNA Complex at 6.5 A Resolution | x-ray diffraction | C | — | — |
| 1L9Z | Thermus aquaticus RNA polymerase HOLOENZYME/FORK-junction promoter DNA complex at 6.5 a resolution | x-ray diffraction | C | — | — |
| 1YNJ | Taq RNA polymerase-Sorangicin complex | x-ray diffraction | C | — | — |
| 1YNJ | Taq RNA polymerase-sorangicin complex | x-ray diffraction | C | — | — |
| 1YNN | Taq RNA polymerase-rifampicin complex | x-ray diffraction | C | — | — |
| 1YNN | Taq RNA polymerase-rifampicin complex | x-ray diffraction | C | — | — |
| 2GHO | Recombinant Thermus aquaticus RNA polymerase for Structural Studies | x-ray diffraction | C | — | — |
| 2GHO | Recombinant thermus aquaticus RNA polymerase for structural studies | x-ray diffraction | C | — | — |
| 3MLQ | Crystal structure of the Thermus thermophilus transcription-repair coupling factor RNA polymerase… | x-ray diffraction | A, B, C, D | — | — |
| 3MLQ | Crystal structure of the thermus thermophilus transcription-repair coupling factor RNA polymerase… | x-ray diffraction | A, B, C, D | — | — |
| 4XAX | Crystal structure of Thermus thermophilus CarD in complex with the Thermus aquaticus RNA polymerase… | x-ray diffraction | A | — | — |
| 4XAX | Crystal structure of thermus thermophilus card in complex with the thermus aquaticus RNA polymerase… | x-ray diffraction | A | — | — |
| 4XLN | Crystal structure of T. aquaticus transcription initiation complex containing bubble promoter and… | x-ray diffraction | C, I | — | 15 (best 0.87) |
| 4XLN | Crystal structure of T. aquaticus transcription initiation complex containing bubble promoter and… | x-ray diffraction | C, I | — | — |
| 4XLP | Crystal structure of T.AQUATICUS transcription initiation complex containing upstream fork promoter | x-ray diffraction | C, I | — | — |
| 4XLQ | Crystal structure of T.aquaticus transcription initiation complex containing upstream fork (-11… | x-ray diffraction | C, I | — | — |
| 4XLQ | Crystal structure of T.AQUATICUS transcription initiation complex containing upstream fork (-11… | x-ray diffraction | C, I | — | — |
| 4XLR | Crystal structure of T.AQUATICUS transcription initiation complex with card containing bubble… | x-ray diffraction | C, I | — | — |
| 4XLS | Crystal structure of T. aquaticus transcription initiation complex with CarD containing upstream… | x-ray diffraction | C, I | — | 12 (best 0.86) |
| 4XLS | Crystal structure of T. aquaticus transcription initiation complex with card containing upstream… | x-ray diffraction | C, I | — | — |
| 5TJG | Thermus aquaticus DELTA1.1-sigmaa HOLOENZYME/DOWNSTREAM-fork promoter complex with an open clamp | x-ray diffraction | C | — | — |
| Q9KWU7 | AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (Q9KWU7) | predicted | A | — | 11 (best 0.75) |
Experiment against prediction
- 4XLP chain C against the predicted model Q9KWU7: TM-score 0.99, RMSD 1.00 Å
- 4XLN chain C against the predicted model Q9KWU7: TM-score 0.99, RMSD 1.07 Å
- 4XLN chain C against the predicted model Q9KWU7: TM-score 0.99, RMSD 1.07 Å
- 4XLS chain C against the predicted model Q9KWU7: TM-score 0.99, RMSD 1.09 Å
- 4XLS chain C against the predicted model Q9KWU7: TM-score 0.99, RMSD 1.09 Å
- 4XLR chain C against the predicted model Q9KWU7: TM-score 0.99, RMSD 1.22 Å
- 4XLQ chain C against the predicted model Q9KWU7: TM-score 0.99, RMSD 1.20 Å
- 4XLQ chain C against the predicted model Q9KWU7: TM-score 0.99, RMSD 1.20 Å
- 5TJG chain C against the predicted model Q9KWU7: TM-score 0.98, RMSD 1.85 Å
- 1YNN chain C against the predicted model Q9KWU7: TM-score 0.96, RMSD 2.25 Å
Elsewhere
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