MolNFT v1 · #28744 · protein
Taq RNA polymerase-sorangicin complex
1YNJ: “Taq RNA polymerase-sorangicin complex”. X-ray diffraction. MolNFT v1 #28744 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1YNJ
- Type
- protein
- Length
- 3,151 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q9KWU8, Q9KWU7, Q9KWU6, Q9EVV4
Structure
x-ray diffraction · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 230 | — | Q9KWU8 |
| B | — | protein | 225 | — | Q9KWU8 |
| C | — | protein | 1114 | — | Q9KWU7 |
| D | — | protein | 1238 | — | Q9KWU6 |
| J | — | protein | 249 | — | Q9KWU6 |
| K | — | protein | 95 | — | Q9EVV4 |
Compared structures
- 1YNJ · Taq RNA polymerase-Sorangicin complex · the same entry in another collection · chain K against K, TM-score 1.00
- Q9KWU7 · AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (Q9KWU7) · a predicted model of the same protein · chain C against A, TM-score 0.96
- Q9KWU8 · AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha (Q9KWU8) · a predicted model of the same protein · chain B against A, TM-score 0.94
- Q9KWU6 · AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta' (Q9KWU6) · a predicted model of the same protein · chain J against A, TM-score 0.94
- Q9EVV4 · AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit omega (Q9EVV4) · a predicted model of the same protein · chain K against A, TM-score 0.93
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9KWU8
- Every structure of UniProt Q9KWU7
- Every structure of UniProt Q9KWU6
- Every structure of UniProt Q9EVV4
- Elsewhere: RCSB PDB 1YNJ · PDBe 1YNJ · UniProt Q9KWU8 · UniProt Q9KWU7 · UniProt Q9KWU6 · UniProt Q9EVV4
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