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MolNFT v1 · #8781 · protein

Snapshots of serine protease catalysis: (a) acyl-enzyme intermediate between porcine pancreatic elastase and human beta-casomorphin-7 at pH 5

1HAX: “Snapshots of serine protease catalysis: (a) acyl-enzyme intermediate between porcine pancreatic elastase and…”. X-ray diffraction, 2 ligands (CA, SO4). MolNFT v1 #8781 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
1HAX
Type
protein
Length
244 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Beta-casomorphin-7; Elastase 1
EC
3.4.21.11
UniProt
P00772
Ligands
CA, SO4

Structure

x-ray diffraction · 2 distinct chains · 11% helix, 40% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ABeta-casomorphin-7protein40% helix, 50% strand—
BElastase 1 (EC 3.4.21.11)protein24011% helix, 40% strandP00772

Ligands and binding sites

  • CA · Calcium ion · metal · chains B
  • SO4 · Sulfate ion · ion · chains B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

  • A–B · 377 Ų buried · 7 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 4 disulfide (disulfide).

Compared structures

  • 1HAX · Snapshots of serine protease catalysis: (A) acyl-enzyme intermediate between porcine… · the same entry in another collection · chain A against A, TM-score 1.00
  • P00772 · AlphaFold monomer V2.0 prediction for chymotrypsin-like elastase family member 1 (P00772) · a predicted model of the same protein · chain B against A, TM-score 1.00

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