GL1X · GenesisL1 explorer

MolNFT v1 · #85704 · protein

Ligand controlled assembly of hexamers, dihexamers, and linear multihexamer structures by an engineered acylated insulin

4AKJ · Insulin a chain: “Ligand controlled assembly of hexamers, dihexamers, and linear multihexamer structures by an engineered…”. X-ray diffraction, 4 ligands (IPH, 16E, ZN). MolNFT v1 #85704 on GenesisL1: 3D structure, binding sites and…

PDB
4AKJ
Type
protein
Length
100 residues
Chains
4
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Insulin a chain; Insulin B chain
UniProt
P01308
Ligands
IPH, 16E, ZN, CL

Structure

x-ray diffraction · 2 distinct chains · 68% helix, 8% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
A, CInsulin a chainprotein2167% helix, 5% strandP01308
B, DInsulin B chainprotein2969% helix, 10% strandP01308

Ligands and binding sites

  • IPH · Phenol · ligand · 2 copies · chains A, B, C, D
  • 16E · N-(16-Carboxyhexadecanoyl)-L-glutamic acid · ligand · chains A, B
  • ZN · Zinc ion · metal · 2 copies · chains B, D
  • CL · Chloride ion · ion · 2 copies · chains B, D

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

5 interfaces between chains.

  • A–B · 657 Ų buried · 7 hydrogen bonds · protein-protein
  • C–D · 647 Ų buried · 6 hydrogen bonds · protein-protein
  • B–D · 646 Ų buried · 9 hydrogen bonds · protein-protein
  • A–D · 50 Ų buried · 1 hydrogen bond · protein-protein
  • B–C · 33 Ų buried · 0 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 6 disulfide, 1 covalent (disulfide, covalent ligand).

Compared structures

  • 4AKJ · Ligand controlled assembly of hexamers, dihexamers, and linear multihexamer structures by… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.