MolNFT v1 · #85704 · protein
Ligand controlled assembly of hexamers, dihexamers, and linear multihexamer structures by an engineered acylated insulin
4AKJ · Insulin a chain: “Ligand controlled assembly of hexamers, dihexamers, and linear multihexamer structures by an engineered…”. X-ray diffraction, 4 ligands (IPH, 16E, ZN). MolNFT v1 #85704 on GenesisL1: 3D structure, binding sites and…
- PDB
- 4AKJ
- Type
- protein
- Length
- 100 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Insulin a chain; Insulin B chain
- UniProt
- P01308
- Ligands
- IPH, 16E, ZN, CL
Structure
x-ray diffraction · 2 distinct chains · 68% helix, 8% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C | Insulin a chain | protein | 21 | 67% helix, 5% strand | P01308 |
| B, D | Insulin B chain | protein | 29 | 69% helix, 10% strand | P01308 |
Ligands and binding sites
- IPH · Phenol · ligand · 2 copies · chains A, B, C, D
- 16E · N-(16-Carboxyhexadecanoyl)-L-glutamic acid · ligand · chains A, B
- ZN · Zinc ion · metal · 2 copies · chains B, D
- CL · Chloride ion · ion · 2 copies · chains B, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
5 interfaces between chains.
- A–B · 657 Ų buried · 7 hydrogen bonds · protein-protein
- C–D · 647 Ų buried · 6 hydrogen bonds · protein-protein
- B–D · 646 Ų buried · 9 hydrogen bonds · protein-protein
- A–D · 50 Ų buried · 1 hydrogen bond · protein-protein
- B–C · 33 Ų buried · 0 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 6 disulfide, 1 covalent (disulfide, covalent ligand).
Compared structures
- 4AKJ · Ligand controlled assembly of hexamers, dihexamers, and linear multihexamer structures by… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P01308
- Elsewhere: RCSB PDB 4AKJ · PDBe 4AKJ · UniProt P01308
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