MolNFT v1 · #8416 · protein

Human CD55 domains 3 & 4

1H04 · Complement decay-accelerating factor: “Human CD55 domains 3 & 4”. X-ray diffraction, 1 ligand (NI). MolNFT v1 #8416 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1H04
Type: protein
Length: 124 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Complement decay-accelerating factor
UniProt: P08174
Ligands: NI

Structure

x-ray diffraction · 1 distinct chain · 0% helix, 46% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
P	Complement decay-accelerating factor	protein	124	0% helix, 46% strand	P08174

Ligands and binding sites

NI · Nickel (II) ion · metal · chains P

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 4 disulfide (disulfide).

Compared structures

1H04 · Human CD55 domains 3 & 4 · the same entry in another collection · chain P against P, TM-score 1.00
P08174 · AlphaFold monomer V2.0 prediction for complement decay-accelerating factor (P08174) · a predicted model of the same protein · chain P against A, TM-score 0.97

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P08174
Elsewhere: RCSB PDB 1H04 · PDBe 1H04 · UniProt P08174

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