MolNFT v1 · #81485 · protein
Crystal structure of the NCX1 intracellular tandem calcium binding DOMAINS(CBD12)
3US9 · SODIUM/CALCIUM exchanger 1: “Crystal structure of the NCX1 intracellular tandem calcium binding DOMAINS(CBD12)”. X-ray diffraction, 1 ligand (CA), 1 pocket (best druggability 0.43). MolNFT v1 #81485 on GenesisL1: 3D structure…
- PDB
- 3US9
- Type
- protein
- Length
- 249 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- SODIUM/CALCIUM exchanger 1
- UniProt
- P23685
- Ligands
- CA
- Pockets
- 1 · best druggability 0.43
Structure
x-ray diffraction · 1 distinct chain · 5% helix, 46% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | SODIUM/CALCIUM exchanger 1 | protein | 249 | 5% helix, 46% strand | P23685 |
Ligands and binding sites
- CA · Calcium ion · metal · 3 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 87 | 0.43 | 0.80 | 24 | empty |
Compared structures
- 3US9 · Crystal Structure of the NCX1 Intracellular Tandem Calcium Binding Domains(CBD12) · the same entry in another collection · chain A against A, TM-score 1.00
- P23685 · AlphaFold monomer V2.0 prediction for SODIUM/CALCIUM exchanger 1 (P23685) · a predicted model of the same protein · chain A against A, TM-score 0.53
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P23685
- Elsewhere: RCSB PDB 3US9 · PDBe 3US9 · UniProt P23685
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