MolNFT v1 · #76434 · protein

Protein tyrosine phosphatase 1B - W179F mutant bound with vanadate

3QKQ · Tyrosine-protein phosphatase non-receptor type 1: “Protein tyrosine phosphatase 1B - W179F mutant bound with vanadate”. X-ray diffraction, 1 ligand (VO4), 1 pocket (best druggability 0.34). MolNFT v1 #76434 on GenesisL1: 3D…

PDB: 3QKQ
Type: protein
Length: 296 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Tyrosine-protein phosphatase non-receptor type 1
EC: 3.1.3.48
UniProt: P18031
Ligands: VO4
Pockets: 1 · best druggability 0.34

Structure

x-ray diffraction · 1 distinct chain · 38% helix, 21% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Tyrosine-protein phosphatase non-receptor type 1 (EC 3.1.3.48)	protein	296	38% helix, 21% strand	P18031

Ligands and binding sites

VO4 · Vanadate ion · ion · chains A
GOL · Glycerol · additive · 3 copies · chains A
TRS · 2-amino-2-hydroxymethyl-propane-1,3-diol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	52	0.34	0.78	14	empty

Compared structures

3QKQ · Protein Tyrosine Phosphatase 1B - W179F mutant bound with vanadate · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P18031
Elsewhere: RCSB PDB 3QKQ · PDBe 3QKQ · UniProt P18031

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