MolNFT v1 · #70789 · protein
Crystal structure of extragenic suppressor protein suhb from bartonella henselae, via combined iodide sad molecular replacement
3LUZ: “Crystal structure of extragenic suppressor protein suhb from bartonella henselae, via combined iodide sad…”. X-ray diffraction, 2 ligands (MG, IOD), 3 pockets (best druggability 0.59). MolNFT v1 #70789 on GenesisL1: 3D structure…
- PDB
- 3LUZ
- Type
- protein
- Length
- 472 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Extragenic suppressor protein suhb
- UniProt
- Q6G1Z6
- Ligands
- MG, IOD
- Pockets
- 3 · best druggability 0.59
Structure
x-ray diffraction · 2 distinct chains · 41% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Extragenic suppressor protein suhb | protein | 238 | 42% helix, 28% strand | Q6G1Z6 |
| B | Extragenic suppressor protein suhb | protein | 234 | 41% helix, 26% strand | Q6G1Z6 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 201 | 0.59 | 0.81 | 38 | IOD |
| 2 | 181 | 0.46 | 0.75 | 24 | empty |
| 3 | 72 | 0.29 | 0.73 | 18 | empty |
Interfaces
1 interface between chains.
- A–B · 1215 Ų buried · 16 hydrogen bonds · protein-protein
Compared structures
- 3LUZ · Crystal structure of extragenic suppressor protein suhB from Bartonella henselae, via… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6G1Z6
- Elsewhere: RCSB PDB 3LUZ · PDBe 3LUZ · UniProt Q6G1Z6
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