Research workbench
Crystal structure of extragenic suppressor protein suhb from bartonella henselae, via combined iodide sad molecular replacement
Analyse Crystal structure of extragenic suppressor protein suhb from bartonella… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3LUZ
- Type
- protein
- Length
- 472 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Extragenic suppressor protein suhb
- UniProt
- Q6G1Z6
- Ligands
- MG, IOD
- Pockets
- 3 · best druggability 0.59
Structure
x-ray diffraction · 2 distinct chains · 41% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Extragenic suppressor protein suhb | protein | 238 | 42% helix, 28% strand | Q6G1Z6 |
| B | Extragenic suppressor protein suhb | protein | 234 | 41% helix, 26% strand | Q6G1Z6 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 201 | 0.59 | 0.81 | 38 | IOD |
| 2 | 181 | 0.46 | 0.75 | 24 | empty |
| 3 | 72 | 0.29 | 0.73 | 18 | empty |
Interfaces
1 interface between chains.
- A–B · 1215 Ų buried · 16 hydrogen bonds · protein-protein
Compared structures
- 3LUZ · Crystal structure of extragenic suppressor protein suhB from Bartonella henselae, via… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6G1Z6
- Elsewhere: RCSB PDB 3LUZ · PDBe 3LUZ · UniProt Q6G1Z6
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