MolNFT v1 · #69546 · protein

Structural basis of GW182 recognition by POLY(A)-binding protein

3KTP · Polyadenylate-binding protein 1: “Structural basis of GW182 recognition by POLY(A)-binding protein”. X-ray diffraction. MolNFT v1 #69546 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 3KTP
Type: protein
Length: 94 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Polyadenylate-binding protein 1; Trinucleotide repeat-containing gene 6C protein
UniProt: P11940, Q9HCJ0

Structure

x-ray diffraction · 2 distinct chains · 66% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Polyadenylate-binding protein 1	protein	78	79% helix, 0% strand	P11940
B	Trinucleotide repeat-containing gene 6C protein	protein	16	0% helix, 0% strand	Q9HCJ0

Interfaces

1 interface between chains.

A–B · 659 Å² buried · 5 hydrogen bonds · protein-protein

Compared structures

3KTP · Structural basis of GW182 recognition by poly(A)-binding protein · the same entry in another collection · chain A against A, TM-score 1.00
P11940 · AlphaFold monomer V2.0 prediction for polyadenylate-binding protein 1 (P11940) · a predicted model of the same protein · chain A against A, TM-score 0.96
Q9HCJ0 · AlphaFold monomer V2.0 prediction for trinucleotide repeat-containing gene 6C protein… · a predicted model of the same protein · chain B against A, TM-score 0.21

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P11940
Every structure of UniProt Q9HCJ0
Elsewhere: RCSB PDB 3KTP · PDBe 3KTP · UniProt P11940 · UniProt Q9HCJ0

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