MolNFT v1 · #67875 · protein
Structural basis of competition between PINCH1 and PINCH2 for binding to the ankyrin repeat domain of integrin-linked kinase
3IXE · Integrin-linked protein kinase: “Structural basis of competition between PINCH1 and PINCH2 for binding to the ankyrin repeat domain of…”. X-ray diffraction, 1 ligand (ZN). MolNFT v1 #67875 on GenesisL1: 3D structure, binding sites…
- PDB
- 3IXE
- Type
- protein
- Length
- 241 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Integrin-linked protein kinase; Lim and senescent cell antigen-like-containing domain…
- EC
- 2.7.11.1
- UniProt
- Q13418, Q7Z4I7
- Ligands
- ZN
Structure
x-ray diffraction · 2 distinct chains · 38% helix, 7% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Integrin-linked protein kinase (EC 2.7.11.1) | protein | 171 | 47% helix, 1% strand | Q13418 |
| B | Lim and senescent cell antigen-like-containing domain protein 2 | protein | 70 | 14% helix, 20% strand | Q7Z4I7 |
Ligands and binding sites
- ZN · Zinc ion · metal · 2 copies · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 1000 Ų buried · 19 hydrogen bonds · protein-protein
Compared structures
- 3IXE · Structural basis of competition between PINCH1 and PINCH2 for binding to the ankyrin… · the same entry in another collection · chain A against A, TM-score 1.00
- Q13418 · AlphaFold monomer V2.0 prediction for integrin-linked protein kinase (Q13418) · a predicted model of the same protein · chain A against A, TM-score 0.95
- Q7Z4I7 · AlphaFold monomer V2.0 prediction for lim and senescent cell antigen- like-containing… · a predicted model of the same protein · chain B against A, TM-score 0.82
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q13418
- Every structure of UniProt Q7Z4I7
- Elsewhere: RCSB PDB 3IXE · PDBe 3IXE · UniProt Q13418 · UniProt Q7Z4I7
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