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Structural basis of competition between PINCH1 and PINCH2 for binding to the ankyrin repeat domain of integrin-linked kinase

Analyse Structural basis of competition between PINCH1 and PINCH2 for binding to the… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
3IXE
Type
protein
Length
241 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Integrin-linked protein kinase; Lim and senescent cell antigen-like-containing domain…
EC
2.7.11.1
UniProt
Q13418, Q7Z4I7
Ligands
ZN

Structure

x-ray diffraction · 2 distinct chains · 38% helix, 7% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AIntegrin-linked protein kinase (EC 2.7.11.1)protein17147% helix, 1% strandQ13418
BLim and senescent cell antigen-like-containing domain protein 2protein7014% helix, 20% strandQ7Z4I7

Ligands and binding sites

  • ZN · Zinc ion · metal · 2 copies · chains B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

  • A–B · 1000 Ų buried · 19 hydrogen bonds · protein-protein

Compared structures

  • 3IXE · Structural basis of competition between PINCH1 and PINCH2 for binding to the ankyrin… · the same entry in another collection · chain A against A, TM-score 1.00
  • Q13418 · AlphaFold monomer V2.0 prediction for integrin-linked protein kinase (Q13418) · a predicted model of the same protein · chain A against A, TM-score 0.95
  • Q7Z4I7 · AlphaFold monomer V2.0 prediction for lim and senescent cell antigen- like-containing… · a predicted model of the same protein · chain B against A, TM-score 0.82

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