MolNFT v1 · #57979 · protein
Crystal structure of the galectin-8 N-terminal carbohydrate recognition domain in complex with lactose sialic acid
3AP7: “Crystal structure of the galectin-8 N-terminal carbohydrate recognition domain in complex with lactose sialic…”. X-ray diffraction, 4 ligands (BGC, GAL, SIA). MolNFT v1 #57979 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 3AP7
- Type
- protein
- Length
- 151 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Galectin-8
- UniProt
- O00214
- Ligands
- BGC, GAL, SIA, CL
Structure
x-ray diffraction · 1 distinct chain · 2% helix, 54% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Galectin-8 | protein | 151 | 2% helix, 54% strand | O00214 |
Ligands and binding sites
- BGC · beta-D-glucopyranose · sugar · chains A
- GAL · beta-D-galactopyranose · sugar · chains A
- SIA · N-acetyl-alpha-neuraminic acid · sugar · chains A
- CL · Chloride ion · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 3AP7 · Crystal structure of the galectin-8 N-terminal carbohydrate recognition domain in complex… · the same entry in another collection · chain A against A, TM-score 1.00
- O00214 · AlphaFold monomer V2.0 prediction for galectin-8 (O00214) · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O00214
- Elsewhere: RCSB PDB 3AP7 · PDBe 3AP7 · UniProt O00214
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