MolNFT v1 · #56585 · protein + RNA

Thiopeptide antibiotic nosiheptide bound to the large ribosomal subunit of deinococcus radiodurans

2ZJP: “Thiopeptide antibiotic nosiheptide bound to the large ribosomal subunit of deinococcus radiodurans”. X-ray diffraction. MolNFT v1 #56585 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 2ZJP
Type: protein + RNA
Length: 6,082 residues
Chains: 31
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: Q9RSS4, Q9RSH2, Q9RSW6, Q9RSK0, C6FX52, Q9RXJ9, Q9RXK2, Q9RXK1, Q9RXJ0, Q9RSL3, Q9RSS7, Q9RXY1, Q9RXJ2, Q9RSK9, Q9RXJ5, Q9RSJ5, Q9RSL2, Q9RWB4, Q9RSW7, Q9RY64, Q9RXJ7, Q9RXK0, Q9RXJ1, Q9RX88, Q9RY65, Q9RRG8, Q9RXJ4, Q9RSL0, P49228

Structure

x-ray diffraction · 31 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
1	—	protein	53	—	Q9RSS4
2	—	protein	46	—	Q9RSH2
3	—	protein	63	—	Q9RSW6
4	—	protein	37	—	Q9RSK0
5	—	protein	12	—	C6FX52
A	—	protein	240	—	Q9RXJ9
B	—	protein	205	—	Q9RXK2
C	—	protein	197	—	Q9RXK1
D	—	protein	177	—	Q9RXJ0
E	—	protein	171	—	Q9RSL3
F	—	protein	144	—	Q9RSS7
G	—	protein	142	—	Q9RXY1
H	—	protein	134	—	Q9RXJ2
I	—	protein	141	—	Q9RSK9
J	—	protein	136	—	Q9RXJ5
K	—	protein	113	—	Q9RSJ5
L	—	protein	104	—	Q9RSL2
M	—	protein	108	—	Q9RWB4
N	—	protein	117	—	Q9RSW7
O	—	protein	94	—	Q9RY64
P	—	protein	127	—	Q9RXJ7
Q	—	protein	93	—	Q9RXK0
R	—	protein	110	—	Q9RXJ1
S	—	protein	175	—	Q9RX88
T	—	protein	84	—	Q9RY65
U	—	protein	72	—	Q9RRG8
V	—	protein	66	—	Q9RXJ4
W	—	protein	55	—	Q9RSL0
X	—	rna	2686	—	—
Y	—	protein	58	—	P49228
Z	—	rna	122	—	—

Compared structures

2ZJP · Thiopeptide antibiotic Nosiheptide bound to the large ribosomal subunit of Deinococcus… · the same entry in another collection · chain C against C, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9RSS4
Every structure of UniProt Q9RSH2
Every structure of UniProt Q9RSW6
Every structure of UniProt Q9RSK0
Every structure of UniProt C6FX52
Every structure of UniProt Q9RXJ9
Every structure of UniProt Q9RXK2
Every structure of UniProt Q9RXK1
Every structure of UniProt Q9RXJ0
Every structure of UniProt Q9RSL3
Every structure of UniProt Q9RSS7
Every structure of UniProt Q9RXY1
Every structure of UniProt Q9RXJ2
Every structure of UniProt Q9RSK9
Every structure of UniProt Q9RXJ5
Every structure of UniProt Q9RSJ5
Every structure of UniProt Q9RSL2
Every structure of UniProt Q9RWB4
Every structure of UniProt Q9RSW7
Every structure of UniProt Q9RY64
Every structure of UniProt Q9RXJ7
Every structure of UniProt Q9RXK0
Every structure of UniProt Q9RXJ1
Every structure of UniProt Q9RX88
Every structure of UniProt Q9RY65
Every structure of UniProt Q9RRG8
Every structure of UniProt Q9RXJ4
Every structure of UniProt Q9RSL0
Every structure of UniProt P49228
Elsewhere: RCSB PDB 2ZJP · PDBe 2ZJP · UniProt Q9RSS4 · UniProt Q9RSH2 · UniProt Q9RSW6 · UniProt Q9RSK0 · UniProt C6FX52 · UniProt Q9RXJ9 · UniProt Q9RXK2 · UniProt Q9RXK1 · UniProt Q9RXJ0 · UniProt Q9RSL3 · UniProt Q9RSS7 · UniProt Q9RXY1 · UniProt Q9RXJ2 · UniProt Q9RSK9 · UniProt Q9RXJ5 · UniProt Q9RSJ5 · UniProt Q9RSL2 · UniProt Q9RWB4 · UniProt Q9RSW7 · UniProt Q9RY64 · UniProt Q9RXJ7 · UniProt Q9RXK0 · UniProt Q9RXJ1 · UniProt Q9RX88 · UniProt Q9RY65 · UniProt Q9RRG8 · UniProt Q9RXJ4 · UniProt Q9RSL0 · UniProt P49228

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