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MolNFT v1 · #51420 · protein

The structure of the family 32 cbm from C. perfringens nanj in complex with galactose

2V72 · Exo-alpha-sialidase: “The structure of the family 32 cbm from C. perfringens nanj in complex with galactose”. X-ray diffraction, 2 ligands (GAL, CA). MolNFT v1 #51420 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
2V72
Type
protein
Length
137 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Exo-alpha-sialidase
UniProt
Q8XMY5
Ligands
GAL, CA

Structure

x-ray diffraction · 1 distinct chain · 7% helix, 55% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AExo-alpha-sialidaseprotein1377% helix, 55% strandQ8XMY5

Ligands and binding sites

  • GAL · beta-D-galactopyranose · sugar · chains A
  • CA · Calcium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 2V72 · The structure of the family 32 CBM from C. perfringens NanJ in complex with galactose · the same entry in another collection · chain A against A, TM-score 1.00

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