MolNFT v1 · #50790 · protein
Solution structure of the ggq domain of yaej protein from escherichia COLI
2RTX · Peptidyl-tRNA hydrolase yaej: “Solution structure of the ggq domain of yaej protein from escherichia COLI”. Solution nmr, 1 pocket (best druggability 0.36). MolNFT v1 #50790 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 2RTX
- Type
- protein
- Length
- 121 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Peptidyl-tRNA hydrolase yaej
- EC
- 3.1.1.29
- UniProt
- P40711
- Pockets
- 1 · best druggability 0.36
Structure
solution nmr · 1 distinct chain · 22% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Peptidyl-tRNA hydrolase yaej (EC 3.1.1.29) | protein | 121 | 22% helix, 21% strand | P40711 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 120 | 0.36 | 0.73 | 20 | empty |
Compared structures
- 2RTX · Solution structure of the GGQ domain of YaeJ protein from Escherichia coli · the same entry in another collection · chain A against A, TM-score 1.00
- P40711 · AlphaFold monomer V2.0 prediction for peptidyl-tRNA hydrolase arfb (P40711) · a predicted model of the same protein · chain A against A, TM-score 0.72
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P40711
- Elsewhere: RCSB PDB 2RTX · PDBe 2RTX · UniProt P40711
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