MolNFT v1 · #50740 · protein
Solution structure of the bromodomain of human BRPF1 in complex with histone H4K5AC peptide
2RS9 · Acetylated lysine 5 of peptide from histone H4: “Solution structure of the bromodomain of human BRPF1 in complex with histone H4K5AC peptide”. Solution nmr. MolNFT v1 #50740 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 2RS9
- Type
- protein
- Length
- 131 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Acetylated lysine 5 of peptide from histone H4; Peregrin
- UniProt
- P62805, P55201
Structure
solution nmr · 2 distinct chains · 58% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Acetylated lysine 5 of peptide from histone H4 | protein | 10 | 0% helix, 0% strand | P62805 |
| B | Peregrin | protein | 121 | 63% helix, 0% strand | P55201 |
Interfaces
1 interface between chains.
- A–B · 397 Ų buried · 4 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 1 modified (acetylation).
Compared structures
- 2RS9 · Solution structure of the bromodomain of human BRPF1 in complex with histone H4K5ac… · the same entry in another collection · chain A against A, TM-score 1.00
- P55201 · AlphaFold monomer V2.0 prediction for peregrin (P55201) · a predicted model of the same protein · chain B against A, TM-score 0.89
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P62805
- Every structure of UniProt P55201
- Elsewhere: RCSB PDB 2RS9 · PDBe 2RS9 · UniProt P62805 · UniProt P55201
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